Taxonomy Citation ID | Reference | ||||
---|---|---|---|---|---|
41635 |
( 2013 ) Flavobacterium squillarum sp. nov., isolated from a freshwater shrimp culture pond, and emended descriptions of Flavobacterium haoranii, Flavobacterium cauense, Flavobacterium terrae and Flavobacterium aquatile. PMID : 23148098 DOI : 10.1099/ijs.0.046425-0 Abstract >>
A bacterial strain, designated CMJ-5(T), was isolated from a freshwater shrimp culture pond in Taiwan and characterized using a polyphasic taxonomic approach. Cells of strain CMJ-5(T) were Gram-stain-negative, strictly aerobic, non-motile, yellow-pigmented rods surrounded by a thick capsule. Growth occurred at 20-35 �XC (optimum, 30 �XC), at pH 6.5-8.0 (optimum, pH 7.0) and with 0-0.5% NaCl (optimum, 0%). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain CMJ-5(T) belonged to the genus Flavobacterium and was related most closely to Flavobacterium haoranii LQY-7(T) with sequence similarity of 94.4%. Strain CMJ-5(T) contained iso-C15:0 (37.5%), iso-C17:0 3-OH (13.4%), iso-C15:0 3-OH (13.1%) and iso-C15:1 G (11.2%) as the predominant fatty acids. The major isoprenoid quinone was MK-6. The polar lipid profile consisted of phosphatidylethanolamine and several uncharacterized aminophospholipids and phospholipids. The major polyamine was homospermidine. The G+C content of the genomic DNA was 42.4 mol%. On the basis of phylogenetic inference and phenotypic data, strain CMJ-5(T) should be classified as a representative of a novel species, for which the name Flavobacterium squillarum sp. nov. is proposed. The type strain is CMJ-5(T) (=BCRC 80405(T)=LMG 26890(T)=KCTC 23915(T)). Emended descriptions of Flavobacterium haoranii, Flavobacterium cauense, Flavobacterium terrae and Flavobacterium aquatile are also proposed.
|
39423 |
Zhang J,
Jiang RB,
Zhang XX,
Hang BJ,
He J,
Li SP,
( 2010 ) Flavobacterium haoranii sp. nov., a cypermethrin-degrading bacterium isolated from a wastewater treatment system. PMID : 20081015 DOI : 10.1099/ijs.0.020776-0 Abstract >>
A Gram-negative, non-spore-forming, yellow-pigmented bacterium, strain LQY-7(T), was isolated from activated sludge treating synthetic pyrethroid-manufacturing wastewater. The taxonomic status of the strain was determined using a polyphasic taxonomic approach. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain LQY-7(T) was a member of the genus Flavobacterium but had low similarities with other species of this genus (95.0 % similarity with Flavobacterium indicum GPTSA100-9(T) and <94 % similarities with other Flavobacterium species). On the basis of phenotypic, genetic and phylogenetic data, strain LQY-7(T) should be classified as a representative of a novel species of the genus Flavobacterium, for which the name Flavobacterium haoranii sp. nov. is proposed; the type strain is LQY-7(T) (=ACCC 05409(T) =KCTC 23008(T)).
|