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Taxonomy Citation ID Reference
44912 Lin  SY, Liu  YC, Hameed  A, Hsu  YH, Huang  HI, Lai  WA, Young  CC,     ( 2016 )

Azospirillum agricola sp. nov., a nitrogen-fixing species isolated from cultivated soil.

International journal of systematic and evolutionary microbiology 66 (3)
PMID : 26786719 DOI  :   10.1099/ijsem.0.000904     DOI  :   10.1099/ijsem.0.000904    
Abstract >>
A polyphasic approach was used to characterize a novel nitrogen-fixing bacterial strain, designated CC-HIH038T, isolated from cultivated soil in Taiwan. Cells of strain CC-HIH038T were Gram-stain-negative, facultatively aerobic and spiral-shaped, with motility provided by a single polar flagellum. The 16S rRNA gene sequence analysis of strain CC-HIH038T showed highest sequence similarity to Azospirillum doebereinerae (98.0 %), Azospirillum thiophilum (97.5 %), Azospirillum rugosum (97.4 %) and Azospirillum zeae (97.2 %) and lower sequence similarity (< 97.0 %) to all other species of the genus Azospirillum. According to DNA-DNA association, the relatedness values of strain CC-HIH038T with A. doebereinerae, A. thiophilum, A. rugosum and A. zeae were 51.8 %, 41.2 %, 56.5 % and 37.5 %, respectively. Strain CC-HIH038T was able to grow at 20-37 �XC and pH 7.0-8.0. Strain CC-HIH038T gave positive amplification for dinitrogen reductase (nifH gene); the activity was recorded as 8.4 nmol ethylene h- 1. The predominant quinone system was ubiquinone Q-10 and the DNA G+C content was 68.8 mol%. The major fatty acids found in strain CC-HIH038T were C16 : 0, iso-C18 : 0, C16 : 0 3-OH, C14 : 0 3-OH/iso-C16 : 1 and C18 : 1�s7c/C18 : 1�s6c. Based on the distinct phylogenetic, phenotypic and chemotaxonomic traits together with results of comparative 16S rRNA gene sequence analysis, strain CC-HIH038T is considered to represent a novel species in the genus Azospirillum, for which the name Azospirillum agricola sp. nov. is proposed. The type strain is CC-HIH038T (= BCRC 80909T = JCM 30827T).
KeywordMeSH Terms
Nitrogen Fixation
Phylogeny
Soil Microbiology
Nitrogen Fixation
Phylogeny
Soil Microbiology

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