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Taxonomy Citation ID Reference
39829 Kumar  A, Bajaj  A, Mathan Kumar  R, Kaur  G, Kaur  N, Kumar Singh  N, Manickam  N, Mayilraj  S,     ( 2015 )

Taxonomic description and genome sequence of Rheinheimera mesophila sp. nov., isolated from an industrial waste site.

International journal of systematic and evolutionary microbiology 65 (10)
PMID : 26220076 DOI  :   10.1099/ijsem.0.000471    
Abstract >>
A novel Gram-staining-negative gammaproteobacterium, designated IITR-13T, was isolated from a pesticide-contaminated soil and characterized using a polyphasic approach. On the basis of 16S rRNA gene sequence analysis, the strain showed the closest similarity (98.7 %) to Rheinheimera tangshanensis JA3-B52T followed by Rheinheimera texasensis A62-14BT (97.7 %) and Rheinheimera soli BD-d46T (97.3 %). The 16S rRNA gene sequence similarity of the novel strain to other members of the genus Rheinheimera was < 97.3 %. However, DNA-DNA hybridization between strain IITR-13T and the type strains of R. tangshanensis, R. texasensis and R. soli was 47.5 �� 0.6, 42.4 �� 0.4 and 39.8 �� 0.3 %, respectively; these values are less than 70 %, a threshold value for delineation of a novel species. The strain had C12 : 0 3-OH, C16 : 0, C17 : 1�s8c, summed feature 3 (C16 : 1�s6c/C16 : 1�s7c) and C18 : 1�s6c as the major fatty acids. The major isoprenoid quinones detected for strain IITR-13T were ubiquinone Q-8 and menaquinone MK-7.The major polar lipids were phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol and seven unknown phospholipids. Based on phenotypic and chemotaxonomic characteristics and analysis of the 16S rRNA gene sequence, the novel strain should be assigned to a novel species, for which the name Rheinheimera mesophila sp. nov. is proposed, with the type strain IITR-13T (= MTCC 12064T = DSM 29723T). Also, we report the draft genome sequence of Rheinheimera mesophila IITR-13T; the draft genome sequence includes 3 749 903 bases and comprises 3449 predicted coding sequences, with a G+C content of 47.8 %. It consists of 102 contigs (>1000 bp).
KeywordMeSH Terms
Industrial Waste
Phylogeny
Soil Microbiology
53276 Sisinthy  S, Chakraborty  D, Adicherla  H, Gundlapally  SR,     ( 2017 )

Emended description of the family Chromatiaceae, phylogenetic analyses of the genera Alishewanella, Rheinheimera and Arsukibacterium, transfer of Rheinheimera longhuensis LH2-2T to the genus Alishewanella and description of Alishewanella alkalitolerans sp. nov. from Lonar Lake, India.

Antonie van Leeuwenhoek 110 (9)
PMID : 28612170 DOI  :   10.1007/s10482-017-0896-5    
Abstract >>
Phylogenetic analyses were performed for members of the family Chromatiaceae, signature nucleotides deduced and the genus Alishewanella transferred to Chromatiaceae. Phylogenetic analyses were executed for the genera Alishewanella, Arsukibacterium and Rheinheimera and the genus Rheinheimera is proposed to be split, with the creation of the Pararheinheimera gen. nov. Furthermore, the species Rheinheimera longhuensis, is transferred to the genus Alishewanella as Alishewanella longhuensis comb. nov. Besides, the genera Alishewanella and Rheinheimera are also emended. Strain LNK-7.1T was isolated from a water sample from the Lonar Lake, India. Cells were Gram-negative, motile rods, positive for catalase, oxidase, phosphatase, contained C16:0, C17:1�s8c, summed feature3 (C16:1�s6c and/or C16:1�s7c) and summed feature 8 (C18:1�s7c) as major fatty acids, PE and PG as the major lipids and Q-8 as the sole respiratory quinone. Phylogenetic analyses using NJ, ME, ML and Maximum parsimony, based on 16S rRNA gene sequences, identified Alishewanella tabrizica RCRI4T as the closely related species of strain LNK-7.1T with a 16S rRNA gene sequence similarity of 98.13%. The DNA-DNA similarity between LNK-7.1T and the closely related species (A. tabrizica) was only 12.0% and, therefore, strain LNK-7.1T was identified as a novel species of the genus Alishewanella with the proposed name Alishewanella alkalitolerans sp. nov. In addition phenotypic characteristics confirmed the species status to strain LNK-7.1T. The type strain of A. alkalitolerans is LNK-7.1T (LMG 29592T = KCTC 52279T), isolated from a water sample collected from the Lonar lake, India.
KeywordMeSH Terms
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Alishewanella alkalitolerans
Lonar lake
Pararheinheimera gen. nov.
Phylogeny
37887 This taxonomic name has been effectively published but not validly published under the rules of the International Code of Nomenclature of Bacteria (Bacteriological Code).

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